Welcome to msproteomicstools’s documentation!

msproteomicstools is a Python library that can be used in LC-MS/MS based proteomics. It features a core library called msproteomicstoolslib and several associated executable scripts that use the library as well as a GUI for visualizing chromatograms, specifically output from OpenSWATH.

For questions, bug reports and contributions, please visit the official GitHub page.

Contents of the library:

Contents of the GUI code:

Contents of the executables:

Indices and tables